News and Events
12/9/2008
Affymetrix Technology Powers Cincinnati Children's Hospital's Innovative Test for Jaundice
12/8/2008
Affymetrix Completes Acquisition of Panomics

Plant and Animal Genome XVII Conference
1/10/2009-1/14/2009
Achieving ROI in Personalized Medicine: Barriers, Incentives, and Pathways to Commercialization
1/27/2009-1/28/2009
Scientific Publications
GeneChip® Scanner 3000 7G
The GeneChip® Scanner 3000 7G is an extension of the GeneChip® Scanner 3000 (GCS 3000) series that allows you to scan next-generation higher-density arrays, including SNP arrays with up to 900,000 SNPs, tiling arrays for transcription and all-exon arrays for whole-genome analysis.
The GCS 3000 7G combines space-saving and other design improvements with speed, superior performance and lower scanner-to-scanner variation to dramatically improve throughput and efficiency in your genetic analysis. The GCS 3000 7G also provides enhanced auto-focus and more consistent scanner-to-scanner biological performance to improve data integrity and data sharing between researchers.
In addition the GCS 3000 7G has been designed to accommodate future advancements in GeneChip® probe array technology. Combined with the GeneChip® AutoLoader, the GCS 3000 7G provides sample tracking, temperature control and walk-away freedom from scanning. This scanner is sold with a powerful computer workstation with quad-core Xeon processor loaded with Affymetrix® GeneChip® Command Console® (AGCC) Software. The purchase price includes a one-year service agreement.
GeneChip® Scanner 3000 High-Resolution Scanning Patch
Do not install this patch unless you have upgraded your GeneChip Scanner 3000 for high resolution processing.
Please Note: If you plan to analyze array data generated from an instrument workstation or server that has been upgraded for high-resolution processing, you will need to apply this patch to your analysis workstation.
In addition, the High-Resolution Scanning Patch must be reapplied to GCOS workstations and server (if applicable) after installing all new library files.
Brochures
The GeneChip® System: An Integrated Solution for Expression and DNA Analysis (pdf, 228 KB)
Data Sheets
GeneChip® Scanner 3000 7G (pdf, 132 KB)
Technical Notes
Complete GeneChip® Instrument System
| Part # | Description | Details |
|---|---|---|
| 00-0213 | GeneChip® Scanner 3000 7G System | Worldwide |
| 00-0362 | GeneChip® Scanner 3000 7G Whole-Genome Association System | Worldwide |
| 00-0218 | GeneChip® Scanner 3000 7G System w/Workstation and AutoLoader | Worldwide |
Scanner System with Workstation
| Part # | Description | Details |
|---|---|---|
| 00-0211 | GeneChip® Scanner 3000 7G with Workstation | |
| 00-0215 | GeneChip® Scanner 3000 7G System w/Workstation and AutoLoader | |
| 00-0214 | GeneArray® 2500 to GeneChip® Scanner 3000 7G Upgrade |
GeneChip® System Components
| Part # | Description | Details |
|---|---|---|
| 00-0210 | GeneChip® Scanner 3000 7G | |
| 00-0205 | GeneChip® Scanner 3000 7G Field Upgrade | |
| 00-0206 | GeneChip® Scanner 3000 7G Targeted Genotyping 4C Upgrade | |
| 00-0223 | GeneChip® Scanner 3000 Targeted Genotyping Upgrade for S/N ≥547 | |
| 00-0183 | GeneChip® Scanner 3000 Targeted Genotyping 7G Upgrade |
GeneChip® Autoloader
| Part # | Description | Details |
|---|---|---|
| 00-0090 | GeneChip® AutoLoader Upgrade with External Barcode Reader-Holder *For Scanner S/N 501 |
*for GeneChip® Scanner 3000 shipped before September 2003 |
| 00-0129 | GeneChip® AutoLoader Upgrade with External Barcode Reader -GeneChip® Scanner 3000 For Scanner S/N 502 |
QC Toolbox
| Part # | Description | Details |
|---|---|---|
| 00-0225 | QC Toolbox Software Kit |
Related Products
| Part # | Description | Details |
|---|---|---|
| GeneChip® AutoLoader | See product page for more information | |
| Complete GeneChip® Instrument System | See product page for more information |
Quick Reference Cards
Scanner 3000 with AutoLoader (zip, 1.9 MB)
Product Updates
Scanner 3000 High-Resolution Scanning Patch
Library Files
GeneChip® Scanner 3000 High-Resolution Scanning Patch (zip, 2.7 MB)
Additional Support




