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Integrated Genome Browser (IGB)
Annotation Files
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Tiling Arrays For Regulation & Transcript Mapping
Publicly Hosted Tiling Data
Array Type |
CEL & BAR GCOS Format |
ARR & CEL AGCC Format |
Library File |
Notes |
|---|---|---|---|---|
7 Chip Set Available on GEO |
7 Chip Set Available on GEO |
7 Chip Set Available on GEO |
Human Tiling 2.0R Array Set - DNaseI sensitivity/hypersensitivity using DNase-array method (Sabo et al Nature Methods 3:511-18, 2006) on Affymetrix whole-genome tiling DNA microarrays. Data submitted to GEO by J. Stamatoyannopoulos. |
|
Available on GEO |
Available on GEO |
Available on GEO |
ChIP-chip analysis of human DREAM complex subunits in G0-arrested and S-phase synchronized cells. Contributed to GEO by Zhu X, Liu XS, Sadasivam S, Litovchick L, DeCaprio JA. |
Tiling Array Sample Data hosted by Affymetrix
Array Type |
CEL & BAR GCOS Format |
ARR & CEL AGCC Format |
Library File |
Notes |
|---|---|---|---|---|
Hela sample with Arabidopsis and Bacillus spikes at 1:100K hybridized onto design 3 of the 1.0R set |
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Human Promoter 1.0R |
SP1_ARR_CEL_ AGCC.zip * Updated on 06/25/07 |
Sp1 IP samples from HL-60 cells |
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Coming soon |
Arabidopsis transcript mapping sample with 3 copy-per-cell Bacillus spikes |
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Coming soon |
S.cerevisiae transcript mapping data from development phase studies |
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Chr 21/22 1.0 C |
Coming soon |
Transcript mapping development data using Chr 21/22 1.0 C array |
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Human Encode 1.0 |
Coming soon |
Transcript mapping data from Encode 2.0 vs 1.0 comparison studyE |
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Human Encode 2.0 |
Coming soon |
Three Encode 2.0 CEL files |
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Coming soon |
ChIP experiment with mouse 3T3 cells using an anti-trimethyl histone H3 antibody |
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Coming soon |
ChIP experiment with mouse 3T3 cells using an anti-trimethyl histone H3 antibody |
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Coming soon |
Transcript Mapping Development Data.
Same sample as Drosophila Tiling 2.0 |
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Coming soon |
Transcript Mapping Development Data.
Same sample as Drosophila Tiling 1.0 |
